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Information Resource
Record information and status
Record ID
115889
Status
Published
Date of creation
2021-02-16 22:18 UTC (austein.mcloughlin@cbd.int)
Date of publication
2021-02-16 22:19 UTC (austein.mcloughlin@cbd.int)

General Information
Title
GMO Genetic Elements Thesaurus (GMO‑GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms
Author
Paulien Adamse, Emilie Dagand, Karen Bohmert-Tatarev, Daniela Wahler, Manoela Miranda, Esther J. Kok, Joachim Bendiek
Author’s contact information
Corresponding author:
Paulien Adamse
Organization(s) involved in the publication of this resource
Federal Office of Consumer Protection and Food Safety (BVL)
Mauerstr. 39-42
Berlin
Germany, 10117
Phone:+49 3018 444-40500
Fax:+49 3018 444-40099
Email:gentechnik@bvl.bund.de
Url:National Reference Laborartory GMO
Wageningen Food Safety Research (WFSR), Wageningen University & Research (Formely RIKILT Wageningen University & Research) (WFSR)
Wageningen Food Safety Research (WFSR), Wageningen University & Research
PO Box 230
Wageningen, Gelderland
Netherlands, 6700 AE
Phone:+31 317 480256
Fax:+31 317 417717
Email:info.wfsr@wur.nl
Url:https://www.wur.eu/food-safety-research
Language(s)
  • English
Publication date
2021-02-05
Subject
Summary, abstract or table of contents
Background
Various databases on genetically modified organisms (GMOs) exist, all with their specific focus to facilitate access to information needed for, e. g., the assistance in risk assessment, the development of detection and identification strategies or inspection and control activities. Each database has its unique approach towards the subject. Often these databases use different terminology to describe the GMOs. For adequate GMO addressing and identification and exchange of GMO-related information it is necessary to use commonly agreed upon concepts and terminology.

Result
A hierarchically structured controlled vocabulary describing the genetic elements inserted into conventional GMOs, and GMOs developed by the use of gen(om)e-editing is presented: the GMO genetic element thesaurus (GMO-GET). GMO-GET can be used for GMO-related documentation, including GMO-related databases. It has initially been developed on the basis of two GMO databases, i.e. the Biosafety Clearing-House and the EUginius database.

Conclusion
The use of GMO-GET will enable consistent and compatible information (harmonisation), also allowing an accurate exchange of information between the different data systems and thereby facilitating their interoperability. GMO-GET can also be used to describe genetic elements that are altered in organisms obtained through current targeted genome-editing techniques.
Thematic areas
Additional Information
Type of resource
  • Article (journal / magazine / newspaper)
Identifier
DOI: 10.1186/s12859-020-03880-0
Publisher and its location
BMC Bioinformatics
Springer Nature
For locations: https://group.springernature.com/gp/group/about-us/locations-contact
Rights
Open access
Format
PDF  - 1.42 MB (15 pages)
Source
Peer-reviewed journal article
Keywords and any other relevant information
Thesaurus; Vocabulary; Genetic elements; LMO; GMO; Database; Detection; Information exchange